Serveur d'exploration sur le peuplier

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

Actinocorallia populi sp. nov., an endophytic actinomycete isolated from a root of Populus adenopoda (Maxim.).

Identifieur interne : 001067 ( Main/Exploration ); précédent : 001066; suivant : 001068

Actinocorallia populi sp. nov., an endophytic actinomycete isolated from a root of Populus adenopoda (Maxim.).

Auteurs : Xiaoguang Li [République populaire de Chine] ; Zhikuan Wang [République populaire de Chine] ; Fengjuan Lu [République populaire de Chine] ; Heming Zhang [République populaire de Chine] ; Jiewei Tian [République populaire de Chine] ; Linling He [République populaire de Chine] ; Yiwen Chu [République populaire de Chine] ; Yongqiang Tian [République populaire de Chine]

Source :

RBID : pubmed:29851378

Descripteurs français

English descriptors

Abstract

An endophytic actinobacterium, strain A251T, was isolated from the root of Populus adenopoda Maxim and subjected to characterization using polyphasic taxonomy. Analysis of the 16S rRNA gene sequence revealed that the isolate represented a member of the phylogenetic cluster of the genus Actinocorallia and was most closely related to Actinocorallia aurantiaca JCM 8201T (98.0 %) and Actinocorallia libanotica IFO 10495T (98.0 %). DNA-DNA hybridization values between A251T and these strains were 41.2 % and 45.0 %, respectively. The G+C content of the DNA was 71.5 mol%. Major fatty acids were C16 : 0, C16 : 1ω7c and C18 : 1ω9c. The peptidoglycan diamino acid of A251T was meso-diaminopimelic acid and the whole-cell hydrolysates contained glucose and ribose. The major menaquinones were MK-9(H4) and MK-9(H6). The phospholipid profile included diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol, an undefined aminophospholipid and two undefined phospholipids. DNA-DNA hybridization data in combination with differences in the biochemical and physiological properties, indicated that A251T should be classified as representing a novel species within the genus Actinocorallia, for which the name Actinocorallia populi sp. nov. is proposed, with A251T (=CGMCC 4.7421T=JCM 32178T) as the type strain.

DOI: 10.1099/ijsem.0.002840
PubMed: 29851378


Affiliations:


Links toward previous steps (curation, corpus...)


Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en">Actinocorallia populi sp. nov., an endophytic actinomycete isolated from a root of Populus adenopoda (Maxim.).</title>
<author>
<name sortKey="Li, Xiaoguang" sort="Li, Xiaoguang" uniqKey="Li X" first="Xiaoguang" last="Li">Xiaoguang Li</name>
<affiliation wicri:level="1">
<nlm:affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065</wicri:regionArea>
<wicri:noRegion>Chengdu 610065</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Wang, Zhikuan" sort="Wang, Zhikuan" uniqKey="Wang Z" first="Zhikuan" last="Wang">Zhikuan Wang</name>
<affiliation wicri:level="1">
<nlm:affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065</wicri:regionArea>
<wicri:noRegion>Chengdu 610065</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Lu, Fengjuan" sort="Lu, Fengjuan" uniqKey="Lu F" first="Fengjuan" last="Lu">Fengjuan Lu</name>
<affiliation wicri:level="1">
<nlm:affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065</wicri:regionArea>
<wicri:noRegion>Chengdu 610065</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Zhang, Heming" sort="Zhang, Heming" uniqKey="Zhang H" first="Heming" last="Zhang">Heming Zhang</name>
<affiliation wicri:level="1">
<nlm:affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065</wicri:regionArea>
<wicri:noRegion>Chengdu 610065</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Tian, Jiewei" sort="Tian, Jiewei" uniqKey="Tian J" first="Jiewei" last="Tian">Jiewei Tian</name>
<affiliation wicri:level="1">
<nlm:affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065</wicri:regionArea>
<wicri:noRegion>Chengdu 610065</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="He, Linling" sort="He, Linling" uniqKey="He L" first="Linling" last="He">Linling He</name>
<affiliation wicri:level="1">
<nlm:affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065</wicri:regionArea>
<wicri:noRegion>Chengdu 610065</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Chu, Yiwen" sort="Chu, Yiwen" uniqKey="Chu Y" first="Yiwen" last="Chu">Yiwen Chu</name>
<affiliation wicri:level="1">
<nlm:affiliation>Sichuan Industrial Institute of Antibiotics, Chengdu University, Chengdu 610052, PR China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Sichuan Industrial Institute of Antibiotics, Chengdu University, Chengdu 610052</wicri:regionArea>
<wicri:noRegion>Chengdu 610052</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Tian, Yongqiang" sort="Tian, Yongqiang" uniqKey="Tian Y" first="Yongqiang" last="Tian">Yongqiang Tian</name>
<affiliation wicri:level="1">
<nlm:affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065</wicri:regionArea>
<wicri:noRegion>Chengdu 610065</wicri:noRegion>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">PubMed</idno>
<date when="2018">2018</date>
<idno type="RBID">pubmed:29851378</idno>
<idno type="pmid">29851378</idno>
<idno type="doi">10.1099/ijsem.0.002840</idno>
<idno type="wicri:Area/Main/Corpus">000E06</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000E06</idno>
<idno type="wicri:Area/Main/Curation">000E06</idno>
<idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000E06</idno>
<idno type="wicri:Area/Main/Exploration">000E06</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en">Actinocorallia populi sp. nov., an endophytic actinomycete isolated from a root of Populus adenopoda (Maxim.).</title>
<author>
<name sortKey="Li, Xiaoguang" sort="Li, Xiaoguang" uniqKey="Li X" first="Xiaoguang" last="Li">Xiaoguang Li</name>
<affiliation wicri:level="1">
<nlm:affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065</wicri:regionArea>
<wicri:noRegion>Chengdu 610065</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Wang, Zhikuan" sort="Wang, Zhikuan" uniqKey="Wang Z" first="Zhikuan" last="Wang">Zhikuan Wang</name>
<affiliation wicri:level="1">
<nlm:affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065</wicri:regionArea>
<wicri:noRegion>Chengdu 610065</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Lu, Fengjuan" sort="Lu, Fengjuan" uniqKey="Lu F" first="Fengjuan" last="Lu">Fengjuan Lu</name>
<affiliation wicri:level="1">
<nlm:affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065</wicri:regionArea>
<wicri:noRegion>Chengdu 610065</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Zhang, Heming" sort="Zhang, Heming" uniqKey="Zhang H" first="Heming" last="Zhang">Heming Zhang</name>
<affiliation wicri:level="1">
<nlm:affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065</wicri:regionArea>
<wicri:noRegion>Chengdu 610065</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Tian, Jiewei" sort="Tian, Jiewei" uniqKey="Tian J" first="Jiewei" last="Tian">Jiewei Tian</name>
<affiliation wicri:level="1">
<nlm:affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065</wicri:regionArea>
<wicri:noRegion>Chengdu 610065</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="He, Linling" sort="He, Linling" uniqKey="He L" first="Linling" last="He">Linling He</name>
<affiliation wicri:level="1">
<nlm:affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065</wicri:regionArea>
<wicri:noRegion>Chengdu 610065</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Chu, Yiwen" sort="Chu, Yiwen" uniqKey="Chu Y" first="Yiwen" last="Chu">Yiwen Chu</name>
<affiliation wicri:level="1">
<nlm:affiliation>Sichuan Industrial Institute of Antibiotics, Chengdu University, Chengdu 610052, PR China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Sichuan Industrial Institute of Antibiotics, Chengdu University, Chengdu 610052</wicri:regionArea>
<wicri:noRegion>Chengdu 610052</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Tian, Yongqiang" sort="Tian, Yongqiang" uniqKey="Tian Y" first="Yongqiang" last="Tian">Yongqiang Tian</name>
<affiliation wicri:level="1">
<nlm:affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</nlm:affiliation>
<country xml:lang="fr">République populaire de Chine</country>
<wicri:regionArea>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065</wicri:regionArea>
<wicri:noRegion>Chengdu 610065</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series>
<title level="j">International journal of systematic and evolutionary microbiology</title>
<idno type="eISSN">1466-5034</idno>
<imprint>
<date when="2018" type="published">2018</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Actinomycetales (classification)</term>
<term>Actinomycetales (genetics)</term>
<term>Actinomycetales (isolation & purification)</term>
<term>Bacterial Typing Techniques (MeSH)</term>
<term>Base Composition (MeSH)</term>
<term>Cell Wall (chemistry)</term>
<term>China (MeSH)</term>
<term>DNA, Bacterial (genetics)</term>
<term>Diaminopimelic Acid (chemistry)</term>
<term>Endophytes (MeSH)</term>
<term>Fatty Acids (chemistry)</term>
<term>Nucleic Acid Hybridization (MeSH)</term>
<term>Peptidoglycan (chemistry)</term>
<term>Phospholipids (chemistry)</term>
<term>Phylogeny (MeSH)</term>
<term>Populus (microbiology)</term>
<term>RNA, Ribosomal, 16S (genetics)</term>
<term>Sequence Analysis, DNA (MeSH)</term>
<term>Soil Microbiology (MeSH)</term>
<term>Vitamin K 2 (analogs & derivatives)</term>
<term>Vitamin K 2 (chemistry)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr">
<term>ADN bactérien (génétique)</term>
<term>ARN ribosomique 16S (génétique)</term>
<term>Acide diamino-pimélique (composition chimique)</term>
<term>Acides gras (composition chimique)</term>
<term>Actinomycetales (classification)</term>
<term>Actinomycetales (génétique)</term>
<term>Actinomycetales (isolement et purification)</term>
<term>Analyse de séquence d'ADN (MeSH)</term>
<term>Chine (MeSH)</term>
<term>Composition en bases nucléiques (MeSH)</term>
<term>Endophytes (MeSH)</term>
<term>Hybridation d'acides nucléiques (MeSH)</term>
<term>Microbiologie du sol (MeSH)</term>
<term>Paroi cellulaire (composition chimique)</term>
<term>Peptidoglycane (composition chimique)</term>
<term>Phospholipides (composition chimique)</term>
<term>Phylogenèse (MeSH)</term>
<term>Populus (microbiologie)</term>
<term>Techniques de typage bactérien (MeSH)</term>
<term>Vitamine K2 (analogues et dérivés)</term>
<term>Vitamine K2 (composition chimique)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="analogs & derivatives" xml:lang="en">
<term>Vitamin K 2</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en">
<term>Diaminopimelic Acid</term>
<term>Fatty Acids</term>
<term>Peptidoglycan</term>
<term>Phospholipids</term>
<term>Vitamin K 2</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en">
<term>DNA, Bacterial</term>
<term>RNA, Ribosomal, 16S</term>
</keywords>
<keywords scheme="MESH" qualifier="analogues et dérivés" xml:lang="fr">
<term>Vitamine K2</term>
</keywords>
<keywords scheme="MESH" qualifier="chemistry" xml:lang="en">
<term>Cell Wall</term>
</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="en">
<term>Actinomycetales</term>
</keywords>
<keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr">
<term>Acide diamino-pimélique</term>
<term>Acides gras</term>
<term>Actinomycetales</term>
<term>Paroi cellulaire</term>
<term>Peptidoglycane</term>
<term>Phospholipides</term>
<term>Vitamine K2</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en">
<term>Actinomycetales</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr">
<term>ADN bactérien</term>
<term>ARN ribosomique 16S</term>
<term>Actinomycetales</term>
</keywords>
<keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en">
<term>Actinomycetales</term>
</keywords>
<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr">
<term>Actinomycetales</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr">
<term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en">
<term>Populus</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Bacterial Typing Techniques</term>
<term>Base Composition</term>
<term>China</term>
<term>Endophytes</term>
<term>Nucleic Acid Hybridization</term>
<term>Phylogeny</term>
<term>Sequence Analysis, DNA</term>
<term>Soil Microbiology</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr">
<term>Analyse de séquence d'ADN</term>
<term>Chine</term>
<term>Composition en bases nucléiques</term>
<term>Endophytes</term>
<term>Hybridation d'acides nucléiques</term>
<term>Microbiologie du sol</term>
<term>Phylogenèse</term>
<term>Techniques de typage bactérien</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">An endophytic actinobacterium, strain A251
<sup>T</sup>
, was isolated from the root of Populus adenopoda Maxim and subjected to characterization using polyphasic taxonomy. Analysis of the 16S rRNA gene sequence revealed that the isolate represented a member of the phylogenetic cluster of the genus Actinocorallia and was most closely related to Actinocorallia aurantiaca JCM 8201
<sup>T</sup>
(98.0 %) and Actinocorallia libanotica IFO 10495
<sup>T</sup>
(98.0 %). DNA-DNA hybridization values between A251
<sup>T</sup>
and these strains were 41.2 % and 45.0 %, respectively. The G+C content of the DNA was 71.5 mol%. Major fatty acids were C16 : 0, C16 : 1ω7c and C18 : 1ω9c. The peptidoglycan diamino acid of A251
<sup>T</sup>
was meso-diaminopimelic acid and the whole-cell hydrolysates contained glucose and ribose. The major menaquinones were MK-9(H4) and MK-9(H6). The phospholipid profile included diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol, an undefined aminophospholipid and two undefined phospholipids. DNA-DNA hybridization data in combination with differences in the biochemical and physiological properties, indicated that A251
<sup>T</sup>
should be classified as representing a novel species within the genus Actinocorallia, for which the name Actinocorallia populi sp. nov. is proposed, with A251
<sup>T</sup>
(=CGMCC 4.7421
<sup>T</sup>
=JCM 32178
<sup>T</sup>
) as the type strain.</div>
</front>
</TEI>
<pubmed>
<MedlineCitation Status="MEDLINE" IndexingMethod="Curated" Owner="NLM">
<PMID Version="1">29851378</PMID>
<DateCompleted>
<Year>2018</Year>
<Month>07</Month>
<Day>18</Day>
</DateCompleted>
<DateRevised>
<Year>2019</Year>
<Month>12</Month>
<Day>11</Day>
</DateRevised>
<Article PubModel="Print-Electronic">
<Journal>
<ISSN IssnType="Electronic">1466-5034</ISSN>
<JournalIssue CitedMedium="Internet">
<Volume>68</Volume>
<Issue>7</Issue>
<PubDate>
<Year>2018</Year>
<Month>Jul</Month>
</PubDate>
</JournalIssue>
<Title>International journal of systematic and evolutionary microbiology</Title>
<ISOAbbreviation>Int J Syst Evol Microbiol</ISOAbbreviation>
</Journal>
<ArticleTitle>Actinocorallia populi sp. nov., an endophytic actinomycete isolated from a root of Populus adenopoda (Maxim.).</ArticleTitle>
<Pagination>
<MedlinePgn>2325-2330</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1099/ijsem.0.002840</ELocationID>
<Abstract>
<AbstractText>An endophytic actinobacterium, strain A251
<sup>T</sup>
, was isolated from the root of Populus adenopoda Maxim and subjected to characterization using polyphasic taxonomy. Analysis of the 16S rRNA gene sequence revealed that the isolate represented a member of the phylogenetic cluster of the genus Actinocorallia and was most closely related to Actinocorallia aurantiaca JCM 8201
<sup>T</sup>
(98.0 %) and Actinocorallia libanotica IFO 10495
<sup>T</sup>
(98.0 %). DNA-DNA hybridization values between A251
<sup>T</sup>
and these strains were 41.2 % and 45.0 %, respectively. The G+C content of the DNA was 71.5 mol%. Major fatty acids were C16 : 0, C16 : 1ω7c and C18 : 1ω9c. The peptidoglycan diamino acid of A251
<sup>T</sup>
was meso-diaminopimelic acid and the whole-cell hydrolysates contained glucose and ribose. The major menaquinones were MK-9(H4) and MK-9(H6). The phospholipid profile included diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol, an undefined aminophospholipid and two undefined phospholipids. DNA-DNA hybridization data in combination with differences in the biochemical and physiological properties, indicated that A251
<sup>T</sup>
should be classified as representing a novel species within the genus Actinocorallia, for which the name Actinocorallia populi sp. nov. is proposed, with A251
<sup>T</sup>
(=CGMCC 4.7421
<sup>T</sup>
=JCM 32178
<sup>T</sup>
) as the type strain.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Li</LastName>
<ForeName>Xiaoguang</ForeName>
<Initials>X</Initials>
<AffiliationInfo>
<Affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Wang</LastName>
<ForeName>Zhikuan</ForeName>
<Initials>Z</Initials>
<AffiliationInfo>
<Affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Lu</LastName>
<ForeName>Fengjuan</ForeName>
<Initials>F</Initials>
<AffiliationInfo>
<Affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Zhang</LastName>
<ForeName>Heming</ForeName>
<Initials>H</Initials>
<AffiliationInfo>
<Affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Tian</LastName>
<ForeName>Jiewei</ForeName>
<Initials>J</Initials>
<AffiliationInfo>
<Affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>He</LastName>
<ForeName>Linling</ForeName>
<Initials>L</Initials>
<AffiliationInfo>
<Affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Chu</LastName>
<ForeName>Yiwen</ForeName>
<Initials>Y</Initials>
<AffiliationInfo>
<Affiliation>Sichuan Industrial Institute of Antibiotics, Chengdu University, Chengdu 610052, PR China.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Tian</LastName>
<ForeName>Yongqiang</ForeName>
<Initials>Y</Initials>
<AffiliationInfo>
<Affiliation>Key laboratory of Leather Chemistry and Engineering (Sichuan University), Ministry of Education and College of Light Industry, Textile & Food Engineering, Sichuan University, Chengdu 610065, PR China.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList>
<PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic">
<Year>2018</Year>
<Month>05</Month>
<Day>31</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo>
<Country>England</Country>
<MedlineTA>Int J Syst Evol Microbiol</MedlineTA>
<NlmUniqueID>100899600</NlmUniqueID>
<ISSNLinking>1466-5026</ISSNLinking>
</MedlineJournalInfo>
<ChemicalList>
<Chemical>
<RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D004269">DNA, Bacterial</NameOfSubstance>
</Chemical>
<Chemical>
<RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D005227">Fatty Acids</NameOfSubstance>
</Chemical>
<Chemical>
<RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D010457">Peptidoglycan</NameOfSubstance>
</Chemical>
<Chemical>
<RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D010743">Phospholipids</NameOfSubstance>
</Chemical>
<Chemical>
<RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D012336">RNA, Ribosomal, 16S</NameOfSubstance>
</Chemical>
<Chemical>
<RegistryNumber>11032-49-8</RegistryNumber>
<NameOfSubstance UI="D024482">Vitamin K 2</NameOfSubstance>
</Chemical>
<Chemical>
<RegistryNumber>523-39-7</RegistryNumber>
<NameOfSubstance UI="C073355">menaquinone 9</NameOfSubstance>
</Chemical>
<Chemical>
<RegistryNumber>583-93-7</RegistryNumber>
<NameOfSubstance UI="D003960">Diaminopimelic Acid</NameOfSubstance>
</Chemical>
</ChemicalList>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList>
<MeshHeading>
<DescriptorName UI="D000192" MajorTopicYN="N">Actinomycetales</DescriptorName>
<QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000302" MajorTopicYN="N">isolation & purification</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D015373" MajorTopicYN="N">Bacterial Typing Techniques</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D001482" MajorTopicYN="N">Base Composition</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D002473" MajorTopicYN="N">Cell Wall</DescriptorName>
<QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D002681" MajorTopicYN="N">China</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D004269" MajorTopicYN="N">DNA, Bacterial</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D003960" MajorTopicYN="N">Diaminopimelic Acid</DescriptorName>
<QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D060026" MajorTopicYN="N">Endophytes</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D005227" MajorTopicYN="N">Fatty Acids</DescriptorName>
<QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D009693" MajorTopicYN="N">Nucleic Acid Hybridization</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D010457" MajorTopicYN="N">Peptidoglycan</DescriptorName>
<QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D010743" MajorTopicYN="N">Phospholipids</DescriptorName>
<QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D010802" MajorTopicYN="Y">Phylogeny</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D012336" MajorTopicYN="N">RNA, Ribosomal, 16S</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D012988" MajorTopicYN="Y">Soil Microbiology</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D024482" MajorTopicYN="N">Vitamin K 2</DescriptorName>
<QualifierName UI="Q000031" MajorTopicYN="N">analogs & derivatives</QualifierName>
<QualifierName UI="Q000737" MajorTopicYN="N">chemistry</QualifierName>
</MeshHeading>
</MeshHeadingList>
<KeywordList Owner="NOTNLM">
<Keyword MajorTopicYN="N">Actinocorallia populi sp. nov</Keyword>
<Keyword MajorTopicYN="N">endophytic actinobacterium</Keyword>
<Keyword MajorTopicYN="N">polyphasic taxonomy</Keyword>
</KeywordList>
</MedlineCitation>
<PubmedData>
<History>
<PubMedPubDate PubStatus="pubmed">
<Year>2018</Year>
<Month>6</Month>
<Day>1</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline">
<Year>2018</Year>
<Month>7</Month>
<Day>19</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez">
<Year>2018</Year>
<Month>6</Month>
<Day>1</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList>
<ArticleId IdType="pubmed">29851378</ArticleId>
<ArticleId IdType="doi">10.1099/ijsem.0.002840</ArticleId>
</ArticleIdList>
</PubmedData>
</pubmed>
<affiliations>
<list>
<country>
<li>République populaire de Chine</li>
</country>
</list>
<tree>
<country name="République populaire de Chine">
<noRegion>
<name sortKey="Li, Xiaoguang" sort="Li, Xiaoguang" uniqKey="Li X" first="Xiaoguang" last="Li">Xiaoguang Li</name>
</noRegion>
<name sortKey="Chu, Yiwen" sort="Chu, Yiwen" uniqKey="Chu Y" first="Yiwen" last="Chu">Yiwen Chu</name>
<name sortKey="He, Linling" sort="He, Linling" uniqKey="He L" first="Linling" last="He">Linling He</name>
<name sortKey="Lu, Fengjuan" sort="Lu, Fengjuan" uniqKey="Lu F" first="Fengjuan" last="Lu">Fengjuan Lu</name>
<name sortKey="Tian, Jiewei" sort="Tian, Jiewei" uniqKey="Tian J" first="Jiewei" last="Tian">Jiewei Tian</name>
<name sortKey="Tian, Yongqiang" sort="Tian, Yongqiang" uniqKey="Tian Y" first="Yongqiang" last="Tian">Yongqiang Tian</name>
<name sortKey="Wang, Zhikuan" sort="Wang, Zhikuan" uniqKey="Wang Z" first="Zhikuan" last="Wang">Zhikuan Wang</name>
<name sortKey="Zhang, Heming" sort="Zhang, Heming" uniqKey="Zhang H" first="Heming" last="Zhang">Heming Zhang</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Bois/explor/PoplarV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 001067 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 001067 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Bois
   |area=    PoplarV1
   |flux=    Main
   |étape=   Exploration
   |type=    RBID
   |clé=     pubmed:29851378
   |texte=   Actinocorallia populi sp. nov., an endophytic actinomycete isolated from a root of Populus adenopoda (Maxim.).
}}

Pour générer des pages wiki

HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i   -Sk "pubmed:29851378" \
       | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd   \
       | NlmPubMed2Wicri -a PoplarV1 

Wicri

This area was generated with Dilib version V0.6.37.
Data generation: Wed Nov 18 12:07:19 2020. Site generation: Wed Nov 18 12:16:31 2020